EnhancerDB
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  3. rs147893122[chr17:54863968]
Enhancers that have rs147893122[chr17:54863968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54855245 54867175 enh32239
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Colon (HCT116) Breast Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs147893122[chr17:54863968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54863556 54864072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773118
chr17 54863804 54865128 ZNF274 GTRD no Bone Marrow (K562) 21773119
chr17 54863804 54865128 ZNF274 GTRD no Bone Marrow (K562) 108273253
chr17 54863902 54864596 ZNF274 GTRD no Liver (HepG2) 108273254
chr17 54863956 54865181 ZNF274 GTRD no Bone Marrow (K562) 21773120
chr17 54863956 54865181 ZNF274 GTRD no Bone Marrow (K562) 108273255
chr17 54863956 54866254 ZNF274 GTRD no Bone Marrow (K562) 21773121
chr17 54863956 54866254 ZNF274 GTRD no Bone Marrow (K562) 108273256
chr17 54863962 54863982 RREB1 JASPAR yes 54913043
Genes associated with rs147893122[chr17:54863968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More