EnhancerDB
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  3. rs147962642[chr17:70407778]
Enhancers that have rs147962642[chr17:70407778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs147962642[chr17:70407778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70407474 70407858 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108289951
chr17 70407487 70407983 ZNF274 GTRD no Cervix (HeLa-S3) 21784775
chr17 70407487 70407983 ZNF274 GTRD no Cervix (HeLa-S3) 108289952
chr17 70407534 70407972 ZNF274 GTRD no Cervix (HeLa-S3) 21784776
chr17 70407534 70407972 ZNF274 GTRD no Cervix (HeLa-S3) 108289953
chr17 70407768 70407782 PLAG1 JASPAR yes 55784861
chr17 70407769 70407780 CDX2 JASPAR yes 55784862
chr17 70407771 70407780 CDX1 JASPAR yes 55784863
chr17 70407776 70407797 ZNF263 JASPAR yes 55784864
Genes associated with rs147962642[chr17:70407778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More