EnhancerDB
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  3. rs147996793[chr1:202006621]
Enhancers that have rs147996793[chr1:202006621]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs147996793[chr1:202006621]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005273 202006678 ZNF143 GTRD no Epithelial (MCF-7) 21365534
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202005488 202006663 ZNF274 GTRD no Cervix (HeLa-S3) 21365536
chr1 202005522 202006664 ZNF143 GTRD no Epithelial (MCF-7) 21365537
chr1 202005749 202008651 ZNF274 GTRD no Bone Marrow (K562) 107857424
chr1 202006583 202008707 ZNF143 GTRD no Epithelial (MCF-7) 21365575
chr1 202006583 202008707 ZNF143 GTRD no Epithelial (MCF-7) 107857425
chr1 202006611 202006621 ALX3 JASPAR yes 34544631
chr1 202006612 202006625 DUXA JASPAR yes 34544632
chr1 202006613 202006624 DUX4 JASPAR yes 34544633
chr1 202006613 202006624 PHOX2A JASPAR yes 34544634
chr1 202006613 202006624 PROP1 JASPAR yes 34544635
chr1 202006617 202006623 JUN TRANSFAC yes 34544637
Genes associated with rs147996793[chr1:202006621], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More