EnhancerDB
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  3. rs148218329[chr1:15527491]
Enhancers that have rs148218329[chr1:15527491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs148218329[chr1:15527491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15527483 15527496 SMAD2 JASPAR yes 26969997
chr1 15527486 15527496 TBR1 JASPAR yes 26969998
chr1 15527486 15527497 TBX2 JASPAR yes 26969999
chr1 15527487 15527497 TBX21 JASPAR yes 26970000
chr1 15527488 15527496 MGA JASPAR yes 26970001
chr1 15527488 15527496 TBX15 JASPAR yes 26970002
chr1 15527488 15527496 TBX1 JASPAR yes 26970003
chr1 15527488 15527496 TBX4 JASPAR yes 26970004
chr1 15527488 15527496 TBX5 JASPAR yes 26970005
chr1 15527488 15527497 ZEB1 JASPAR yes 26970006
chr1 15527488 15527501 ZBTB18 JASPAR yes 26970007
chr1 15527489 15527499 FIGLA JASPAR yes 26970008
chr1 15527489 15527499 ID4 JASPAR yes 26970009
chr1 15527489 15527499 TCF3 JASPAR yes 26970010
chr1 15527489 15527499 TCF4 JASPAR yes 26970011
chr1 15527490 15527499 SNAI2 JASPAR yes 26970012
chr1 15527491 15527496 USF2 TRANSFAC yes 26970013
Genes associated with rs148218329[chr1:15527491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More