EnhancerDB
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  3. rs148380234[chr17:53518373]
Enhancers that have rs148380234[chr17:53518373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs148380234[chr17:53518373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53518364 53518373 SNAI2 JASPAR yes 54851084
chr17 53518364 53518374 ID4 JASPAR yes 54851085
chr17 53518364 53518374 TCF3 JASPAR yes 54851086
chr17 53518364 53518374 TCF4 JASPAR yes 54851087
Genes associated with rs148380234[chr17:53518373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More