EnhancerDB
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  3. rs148394625[chr10:22542217]
Enhancers that have rs148394625[chr10:22542217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 22527025 22543355 enh27901
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs148394625[chr10:22542217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 22541573 22543128 ZNF143 GTRD no Epithelial (MCF-7) 21421380
chr10 22541742 22542236 TCF7L2 GTRD no Colon (HCT116) 21421381
chr10 22541840 22542385 ZNF143 GTRD no Epithelial (MCF-7) 21421382
chr10 22541841 22542251 ZNF143 GTRD no Epithelial (MCF-7) 21421383
chr10 22541900 22542269 ZNF143 GTRD no Epithelial (MCF-7) 21421384
chr10 22541991 22542277 ZNF143 GTRD no Epithelial (MCF-7) 21421385
chr10 22542046 22542847 ZNF143 GTRD no Epithelial (MCF-7) 21421386
chr10 22542213 22542227 GATA2 JASPAR yes 125953885
chr10 22542215 22542223 GATA3 JASPAR yes 125953886
chr10 22542215 22542223 GATA5 JASPAR yes 125953887
Genes associated with rs148394625[chr10:22542217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More