EnhancerDB
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  3. rs148408288[chr2:26944692]
Enhancers that have rs148408288[chr2:26944692]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26940914 26949809 enh18371
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Heart
chr2 26942649 26946100 vista816
VISTA
Transcript factors that have rs148408288[chr2:26944692]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26944132 26945332 TCF7L2 UCSC Txn Factor no Conserved 107690665
chr2 26944481 26944921 TFAP2C UCSC Txn Factor no Conserved 107690667
chr2 26944503 26944999 TCF12 UCSC Txn Factor no Conserved 107690668
chr2 26944507 26945009 EP300 UCSC Txn Factor no Conserved 107690669
chr2 26944524 26944908 TFAP2A UCSC Txn Factor no Conserved 107690670
chr2 26944593 26944840 FOXA1 UCSC Txn Factor no Conserved 107690671
chr2 26944607 26944833 FOXA2 UCSC Txn Factor no Conserved 107690672
chr2 26944681 26944696 TFAP2A JASPAR yes 68244846
chr2 26944681 26944696 TFAP2C JASPAR yes 68244847
chr2 26944681 26944696 TFAP2A JASPAR yes 72549076
chr2 26944681 26944696 TFAP2C JASPAR yes 72549077
chr2 26944689 26944700 FOXA1 JASPAR yes 68244848
chr2 26944689 26944700 FOXA1 JASPAR yes 72549078
Genes associated with rs148408288[chr2:26944692], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More