EnhancerDB
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  3. rs148725475[chr12:46554130]
Enhancers that have rs148725475[chr12:46554130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs148725475[chr12:46554130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46552769 46554541 TCF7L2 GTRD no Colon (HCT116) 21540723
chr12 46552876 46554399 ZNF274 GTRD no Cervix (HeLa-S3) 21540726
chr12 46552926 46554356 TCF7L2 GTRD no Colon (HCT116) 21540729
chr12 46553127 46554380 ZNF274 GTRD no Cervix (HeLa-S3) 21540738
chr12 46553150 46554196 ZNF274 GTRD no Cervix (HeLa-S3) 21540739
chr12 46553158 46554597 ZBTB33 GTRD no Brain (SK-N-SH) 21540742
chr12 46553200 46558410 ZBTB33 GTRD no Brain (SK-N-SH) 21540745
chr12 46553204 46554795 ZBTB33 GTRD no Brain (SK-N-SH) 21540746
chr12 46553205 46554581 ZBTB33 GTRD no Brain (SK-N-SH) 21540747
chr12 46553231 46554636 ZNF274 GTRD no Cervix (HeLa-S3) 21540750
chr12 46553849 46554179 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540762
chr12 46553874 46554133 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540763
chr12 46553915 46554825 ZBTB33 GTRD no Brain (SK-N-SH) 21540764
chr12 46553917 46554553 ZBTB33 GTRD no Brain (SK-N-SH) 21540765
chr12 46553919 46554670 ZBTB33 GTRD no Brain (SK-N-SH) 21540766
chr12 46553938 46554427 ZBTB33 GTRD no Brain (SK-N-SH) 21540767
chr12 46554042 46554352 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21540768
chr12 46554124 46554139 HNF1A JASPAR yes 120599835
chr12 46554125 46554138 HNF1B JASPAR yes 120599836
chr12 46554127 46554133 TBP TRANSFAC yes 120599837
Genes associated with rs148725475[chr12:46554130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More