EnhancerDB
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  3. rs148790340[chr17:57492879]
Enhancers that have rs148790340[chr17:57492879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57488685 57509755 enh17259
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Heart
Transcript factors that have rs148790340[chr17:57492879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57492454 57494257 ZNF143 GTRD no Epithelial (MCF-7) 21774915
chr17 57492656 57495320 ZNF143 GTRD no Epithelial (MCF-7) 21774916
chr17 57492773 57493163 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21774917
chr17 57492791 57494095 ZNF274 GTRD no Bone Marrow (K562) 21774918
chr17 57492861 57492882 IRF1 JASPAR yes 55057254
chr17 57492865 57492880 PRDM1 JASPAR yes 55057255
chr17 57492876 57492897 REST JASPAR yes 55057256
Genes associated with rs148790340[chr17:57492879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More