EnhancerDB
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  3. rs148852535[chr15:40347623]
Enhancers that have rs148852535[chr15:40347623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148852535[chr15:40347623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40344689 40349243 AR GTRD no Prostate (PC-3) 21649476
chr15 40344689 40349243 AR GTRD no Prostate (PC-3) 108133763
chr15 40346635 40349469 ZNF143 GTRD no Epithelial (MCF-7) 21649483
chr15 40346635 40349469 ZNF143 GTRD no Epithelial (MCF-7) 108133770
chr15 40346980 40347636 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21649509
chr15 40346980 40347636 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108133801
chr15 40347081 40348064 TCF7L2 GTRD no Colon (HCT116) 21649520
chr15 40347081 40348064 TCF7L2 GTRD no Colon (HCT116) 108133813
chr15 40347174 40348108 TCF7L2 GTRD no Colon (HCT116) 21649523
chr15 40347181 40348082 TCF7L2 GTRD no Colon (HCT116) 21649524
chr15 40347307 40347963 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21649525
chr15 40347507 40348343 TCF7L2 GTRD no Colon (HCT116) 21649527
chr15 40347621 40347632 FOXA1 JASPAR yes 22924002
chr15 40347623 40347627 LFA1 TRANSFAC yes 22924003
Genes associated with rs148852535[chr15:40347623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More