EnhancerDB
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  3. rs148945385[chr1:172879550]
Enhancers that have rs148945385[chr1:172879550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs148945385[chr1:172879550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172879541 172879561 RREB1 JASPAR yes 33164891
chr1 172879545 172879551 TCF4 TRANSFAC yes 33164892
chr1 172879545 172879557 FOXI1 JASPAR yes 33164893
chr1 172879545 172879560 FOXP1 JASPAR yes 33164894
chr1 172879546 172879557 FOXP2 JASPAR yes 33164895
chr1 172879546 172879558 FOXC2 JASPAR yes 33164896
chr1 172879546 172879560 FOXF2 JASPAR yes 33164897
chr1 172879547 172879555 FOXG1 JASPAR yes 33164898
chr1 172879547 172879555 FOXO3 JASPAR yes 33164899
chr1 172879549 172879561 FOXI1 JASPAR yes 33164900
Genes associated with rs148945385[chr1:172879550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More