EnhancerDB
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  3. rs149016971[chr17:39819301]
Enhancers that have rs149016971[chr17:39819301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs149016971[chr17:39819301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 21758082
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 108259243
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 21758083
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 108259244
chr17 39819298 39819313 PRDM1 JASPAR yes 54270004
chr17 39819298 39819313 STAT2 JASPAR yes 54270005
chr17 39819299 39819313 STAT1 JASPAR yes 54270006
chr17 39819300 39819312 IRF1 JASPAR yes 54270007
Genes associated with rs149016971[chr17:39819301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More