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- rs149038860[chr19:3688254]
Enhancers that have rs149038860[chr19:3688254]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3679785 |
3695263 |
enh17869 |
|
|
Transcript factors that have rs149038860[chr19:3688254]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3687156
|
3689032
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368533
|
|
|
chr19
|
3687164
|
3689447
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368534
|
|
|
chr19
|
3687246
|
3690008
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368536
|
|
|
chr19
|
3687274
|
3689022
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368537
|
|
|
chr19
|
3687315
|
3688254
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108368540
|
|
|
chr19
|
3687322
|
3689980
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368542
|
|
|
chr19
|
3687323
|
3689475
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368543
|
|
|
chr19
|
3687327
|
3688301
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368544
|
|
|
chr19
|
3687331
|
3689547
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368546
|
|
|
chr19
|
3687351
|
3688762
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108368548
|
|
|
chr19
|
3687361
|
3689021
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368549
|
|
|
chr19
|
3687380
|
3688932
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368551
|
|
|
chr19
|
3687381
|
3688306
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108368552
|
|
|
chr19
|
3687389
|
3688759
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368553
|
|
|
chr19
|
3687389
|
3688898
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368554
|
|
|
chr19
|
3687393
|
3688259
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108368556
|
|
|
chr19
|
3687403
|
3688375
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108368557
|
|
|
chr19
|
3687432
|
3688329
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108368562
|
|
|
chr19
|
3687435
|
3688425
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368563
|
|
|
chr19
|
3687440
|
3688644
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368564
|
|
|
chr19
|
3687454
|
3688514
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108368565
|
|
|
chr19
|
3687455
|
3688555
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368566
|
|
|
chr19
|
3687532
|
3689017
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108368568
|
|
|
chr19
|
3687537
|
3688855
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368569
|
|
|
chr19
|
3687567
|
3688523
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368571
|
|
|
chr19
|
3687578
|
3688566
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368572
|
|
|
chr19
|
3687582
|
3688298
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108368574
|
|
|
chr19
|
3687585
|
3688860
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368575
|
|
|
chr19
|
3687621
|
3688264
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108368578
|
|
|
chr19
|
3687621
|
3688388
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108368579
|
|
|
chr19
|
3687639
|
3688457
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108368582
|
|
|
chr19
|
3687682
|
3688364
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108368584
|
|
|
chr19
|
3687737
|
3688701
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108368587
|
|
|
chr19
|
3687749
|
3688410
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108368589
|
|
|
chr19
|
3687780
|
3688322
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108368593
|
|
|
chr19
|
3687822
|
3688369
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108368596
|
|
|
chr19
|
3687832
|
3688615
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108368597
|
|
|
chr19
|
3688254
|
3688266
|
TFAP2C
|
JASPAR
|
yes
|
|
112145221
|
|
Genes associated with rs149038860[chr19:3688254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
3976054
|
3985467
|
-
|
EEF2
|
ENSG00000167658.11
|
3985467
|
287800
|
Ovary
|
0.154987
|
16825
|
|