EnhancerDB
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  3. rs149080580[chr1:212406491]
Enhancers that have rs149080580[chr1:212406491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212396705 212423635 enh12640
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs149080580[chr1:212406491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212406477 212406494 RARA JASPAR yes 35112856
chr1 212406477 212406494 RXRA JASPAR yes 35112857
chr1 212406487 212406492 SP1 TRANSFAC yes 35112860
Genes associated with rs149080580[chr1:212406491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More