EnhancerDB
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  3. rs149142239[chr16:88370899]
Enhancers that have rs149142239[chr16:88370899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs149142239[chr16:88370899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88369785 88373141 ZNF143 GTRD no Epithelial (MCF-7) 21736132
chr16 88370233 88371104 ZNF143 GTRD no Epithelial (MCF-7) 21736138
chr16 88370367 88371092 TCF7L2 GTRD no Colon (HCT116) 21736139
chr16 88370675 88371229 ZNF274 GTRD no Bone Marrow (K562) 21736140
chr16 88370742 88370971 ZNF143 GTRD no Epithelial (MCF-7) 21736141
chr16 88370856 88373232 ZNF274 GTRD no Bone Marrow (K562) 21736142
chr16 88370899 88370910 EBF1 JASPAR yes 12280396
chr16 88370899 88370914 ZBTB33 JASPAR yes 12280397
Genes associated with rs149142239[chr16:88370899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 87417601 87438385 + MAP1LC3B ENSG00000140941.8 87417601 932514 Adrenal 0.640237 15144