EnhancerDB
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  3. rs149197260[chr2:238805272]
Enhancers that have rs149197260[chr2:238805272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238789822 238819991 enh19403
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 238803368 238807597 vista1021
VISTA
Transcript factors that have rs149197260[chr2:238805272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238805260 238805272 GRHL1 JASPAR yes 68303778
chr2 238805260 238805272 GRHL1 JASPAR yes 82144229
chr2 238805262 238805272 MSC JASPAR yes 68303779
chr2 238805262 238805272 MSC JASPAR yes 82144230
Genes associated with rs149197260[chr2:238805272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More