EnhancerDB
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  3. rs149199328[chr1:48965031]
Enhancers that have rs149199328[chr1:48965031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 48956205 48969115 enh11841
Liver (HepG2) Brain (SK-N-MC) Large Intestine Astrocyte Bone (Osteoblast) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs149199328[chr1:48965031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 48965020 48965033 SCRT2 JASPAR yes 28743385
chr1 48965020 48965035 SCRT1 JASPAR yes 28743386
chr1 48965020 48965035 ZIC4 JASPAR yes 28743387
chr1 48965021 48965035 ZIC1 JASPAR yes 28743388
chr1 48965024 48965033 SNAI2 JASPAR yes 28743389
chr1 48965024 48965034 FIGLA JASPAR yes 28743390
chr1 48965024 48965034 ID4 JASPAR yes 28743391
chr1 48965024 48965034 MSC JASPAR yes 28743392
chr1 48965024 48965034 MYF6 JASPAR yes 28743393
chr1 48965024 48965034 TCF3 JASPAR yes 28743394
chr1 48965024 48965034 TCF4 JASPAR yes 28743395
chr1 48965026 48965035 ZEB1 JASPAR yes 28743396
Genes associated with rs149199328[chr1:48965031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More