EnhancerDB
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  3. rs149220369[chr19:4977050]
Enhancers that have rs149220369[chr19:4977050]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149220369[chr19:4977050]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 21842893
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 108374027
chr19 4975924 4977363 AR GTRD no Prostate (PC-3) 21842894
chr19 4975924 4977363 AR GTRD no Prostate (PC-3) 108374028
chr19 4976075 4977061 ZNF143 GTRD no Epithelial (MCF-7) 21842897
chr19 4976075 4977061 ZNF143 GTRD no Epithelial (MCF-7) 108374031
chr19 4976153 4977201 ZBTB33 GTRD no Lung (A549) 108374036
chr19 4976191 4977169 ZNF274 GTRD no Cervix (HeLa-S3) 21842904
chr19 4976191 4977169 ZNF274 GTRD no Cervix (HeLa-S3) 108374043
chr19 4976214 4977195 ZNF274 GTRD no Bone Marrow (K562) 108374051
chr19 4976245 4977086 ZNF143 GTRD no Epithelial (MCF-7) 21842913
chr19 4976245 4977086 ZNF143 GTRD no Epithelial (MCF-7) 108374060
chr19 4976257 4977867 ZNF274 GTRD no Blood (GM12878) 108374067
chr19 4976258 4977090 ZNF143 GTRD no Epithelial (MCF-7) 21842919
chr19 4976258 4977090 ZNF143 GTRD no Epithelial (MCF-7) 108374069
chr19 4976278 4977062 ZNF143 GTRD no Epithelial (MCF-7) 21842926
chr19 4976278 4977062 ZNF143 GTRD no Epithelial (MCF-7) 108374083
chr19 4976358 4977167 ZBTB33 GTRD no Lung (A549) 108374115
chr19 4977031 4977052 IRF1 JASPAR yes 112201339
chr19 4977032 4977053 IRF1 JASPAR yes 112201341
chr19 4977033 4977054 IRF1 JASPAR yes 112201342
chr19 4977038 4977053 FOXP1 JASPAR yes 112201343
chr19 4977038 4977059 IRF1 JASPAR yes 112201344
chr19 4977044 4977065 IRF1 JASPAR yes 112201345
chr19 4977045 4977060 FOXP1 JASPAR yes 112201346
chr19 4977046 4977057 FOXP2 JASPAR yes 112201347
chr19 4977047 4977062 FOXP1 JASPAR yes 112201348
chr19 4977050 4977065 FOXP1 JASPAR yes 112201349
chr19 4977050 4977065 MEF2C JASPAR yes 112201350
chr19 4977050 4977071 IRF1 JASPAR yes 112201351
Genes associated with rs149220369[chr19:4977050], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More