EnhancerDB
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  3. rs149393545[chr1:52364018]
Enhancers that have rs149393545[chr1:52364018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52359912 52371075 enh11849
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs149393545[chr1:52364018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52364008 52364024 RFX2 JASPAR yes 28874279
chr1 52364008 52364024 RFX3 JASPAR yes 28874280
chr1 52364008 52364024 RFX4 JASPAR yes 28874281
chr1 52364008 52364024 RFX5 JASPAR yes 28874282
chr1 52364009 52364028 RFX2 JASPAR yes 28874283
Genes associated with rs149393545[chr1:52364018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More