EnhancerDB
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  3. rs149402550[chr17:79704009]
Enhancers that have rs149402550[chr17:79704009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs149402550[chr17:79704009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79701635 79704037 TCF7L2 GTRD no Colon (HCT116) 21798354
chr17 79702797 79704022 TCF7L2 GTRD no Colon (HCT116) 21798383
chr17 79702845 79704061 TCF7L2 GTRD no Colon (HCT116) 21798385
chr17 79703429 79704209 TCF7L2 GTRD no Colon (HCT116) 21798389
chr17 79704002 79704017 HNF1A JASPAR yes 56341173
chr17 79704004 79704020 POU4F2 JASPAR yes 56341174
chr17 79704004 79704025 IRF1 JASPAR yes 56341175
chr17 79704006 79704021 FOXP1 JASPAR yes 56341176
Genes associated with rs149402550[chr17:79704009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More