EnhancerDB
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  3. rs149406762[chr17:53511310]
Enhancers that have rs149406762[chr17:53511310]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs149406762[chr17:53511310]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53510495 53511577 POLR2A UCSC Txn Factor no Conserved 108273048
chr17 53510998 53511314 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772574
chr17 53511012 53511372 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772575
chr17 53511071 53511547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772577
chr17 53511121 53511457 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772579
chr17 53511123 53511519 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772580
chr17 53511129 53511469 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772581
chr17 53511131 53511515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772582
chr17 53511135 53511479 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772583
chr17 53511138 53511508 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772584
chr17 53511140 53511530 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772585
chr17 53511146 53511416 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772586
chr17 53511146 53511426 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772587
chr17 53511154 53511484 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772588
chr17 53511157 53511433 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772589
chr17 53511158 53511488 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772590
chr17 53511161 53511461 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772591
chr17 53511174 53511448 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772592
chr17 53511176 53511402 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772593
chr17 53511177 53511437 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772594
chr17 53511183 53511407 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772595
chr17 53511183 53511444 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772596
chr17 53511193 53511369 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772597
chr17 53511205 53511435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772598
chr17 53511210 53511434 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772599
chr17 53511212 53511424 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772600
chr17 53511217 53511328 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772601
chr17 53511225 53511319 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772602
chr17 53511248 53511498 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772603
chr17 53511307 53511322 RFX5 JASPAR yes 54849950
chr17 53511310 53511319 NFIX JASPAR yes 54849951
Genes associated with rs149406762[chr17:53511310], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More