EnhancerDB
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  3. rs149476293[chr12:117038208]
Enhancers that have rs149476293[chr12:117038208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149476293[chr12:117038208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117037744 117038360 TCF7L2 GTRD no Colon (HCT116) 21577604
chr12 117037838 117038385 TCF7L2 GTRD no Colon (HCT116) 21577605
chr12 117037988 117039003 AR GTRD no Prostate (PC-3) 21577606
chr12 117038139 117038712 ZBTB33 GTRD no Lung (A549) 21577607
chr12 117038197 117038211 PLAG1 JASPAR yes 124013546
chr12 117038204 117038209 SP1 TRANSFAC yes 124013547
chr12 117038205 117038210 SP1 TRANSFAC yes 124013548
chr12 117038205 117038214 THAP1 JASPAR yes 124013549
chr12 117038208 117038212 LFA1 TRANSFAC yes 124013550
Genes associated with rs149476293[chr12:117038208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More