EnhancerDB
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  3. rs149542579[chr17:33409868]
Enhancers that have rs149542579[chr17:33409868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 33404685 33414376 enh4367
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Brain (SK-N-SH) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs149542579[chr17:33409868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 33409865 33409872 NKX3-1 JASPAR yes 53994850
chr17 33409868 33409881 POU2F2 JASPAR yes 53994851
chr17 33409868 33409882 POU1F1 JASPAR yes 53994852
Genes associated with rs149542579[chr17:33409868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More