EnhancerDB
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  3. rs149557889[chr6:110854359]
Enhancers that have rs149557889[chr6:110854359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149557889[chr6:110854359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110854350 110854365 FOXA1 JASPAR yes 104294877
chr6 110854351 110854362 FOXB1 JASPAR yes 104294878
chr6 110854351 110854362 FOXC1 JASPAR yes 104294879
chr6 110854357 110854370 POU3F3 JASPAR yes 104294880
chr6 110854357 110854371 POU1F1 JASPAR yes 104294881
chr6 110854358 110854370 POU3F2 JASPAR yes 104294882
chr6 110854359 110854370 PROP1 JASPAR yes 104294883
Genes associated with rs149557889[chr6:110854359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More