EnhancerDB
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  3. rs149563572[chr16:85188359]
Enhancers that have rs149563572[chr16:85188359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149563572[chr16:85188359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85186712 85188408 TCF7L2 GTRD no Colon (HCT116) 108213457
chr16 85186822 85188372 ZNF143 GTRD no Epithelial (MCF-7) 21720414
chr16 85186822 85188372 ZNF143 GTRD no Epithelial (MCF-7) 108213459
chr16 85186859 85188403 TCF7L2 GTRD no Colon (HCT116) 108213461
chr16 85186862 85188373 TCF7L2 GTRD no Colon (HCT116) 108213462
chr16 85186866 85188425 TCF7L2 GTRD no Colon (HCT116) 108213463
chr16 85186891 85188369 ZNF143 GTRD no Epithelial (MCF-7) 21720416
chr16 85186891 85188369 ZNF143 GTRD no Epithelial (MCF-7) 108213465
chr16 85188351 85188361 ID4 JASPAR yes 12026403
chr16 85188357 85188367 RORA JASPAR yes 12026405
Genes associated with rs149563572[chr16:85188359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More