EnhancerDB
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  3. rs149643285[chr19:5020202]
Enhancers that have rs149643285[chr19:5020202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5019125 5039375 enh4975
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs149643285[chr19:5020202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5020184 5020204 RREB1 JASPAR yes 112206110
chr19 5020194 5020207 ZBTB18 JASPAR yes 112206111
chr19 5020195 5020215 RREB1 JASPAR yes 112206112
chr19 5020196 5020205 SNAI2 JASPAR yes 112206113
chr19 5020196 5020206 FIGLA JASPAR yes 112206114
chr19 5020196 5020206 ID4 JASPAR yes 112206115
chr19 5020196 5020206 TCF3 JASPAR yes 112206116
chr19 5020196 5020206 TCF4 JASPAR yes 112206117
Genes associated with rs149643285[chr19:5020202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More