EnhancerDB
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  3. rs149648071[chr17:55680347]
Enhancers that have rs149648071[chr17:55680347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149648071[chr17:55680347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55680343 55680349 ESR1 TRANSFAC yes 54974042
chr17 55680344 55680355 CDX2 JASPAR yes 54974043
chr17 55680345 55680349 ESR1 TRANSFAC yes 54974044
chr17 55680345 55680356 HOXA10 JASPAR yes 54974045
chr17 55680345 55680356 HOXC11 JASPAR yes 54974046
chr17 55680345 55680356 HOXC12 JASPAR yes 54974047
chr17 55680345 55680356 HOXD12 JASPAR yes 54974048
chr17 55680346 55680355 CDX1 JASPAR yes 54974049
chr17 55680346 55680356 HOXC10 JASPAR yes 54974050
chr17 55680346 55680356 HOXD11 JASPAR yes 54974051
Genes associated with rs149648071[chr17:55680347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More