EnhancerDB
  1. Home
  2. SNP
  3. rs149717550[chr1:227940426]
Enhancers that have rs149717550[chr1:227940426]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227936025 227954000 enh47302
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs149717550[chr1:227940426]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227940415 227940428 ZBTB18 JASPAR yes 35885141
chr1 227940423 227940436 SMAD2 JASPAR yes 35885142
Genes associated with rs149717550[chr1:227940426], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More