EnhancerDB
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  3. rs149779478[chr1:201573339]
Enhancers that have rs149779478[chr1:201573339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs149779478[chr1:201573339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201570153 201579304 ZNF274 GTRD no Bone Marrow (K562) 107856725
chr1 201573324 201573342 TP73 JASPAR yes 34512222
chr1 201573329 201573348 REST JASPAR yes 34512223
chr1 201573330 201573344 TLX1 JASPAR yes 34512224
chr1 201573334 201573344 SP1 JASPAR yes 34512225
Genes associated with rs149779478[chr1:201573339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More