EnhancerDB
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  3. rs149829443[chr19:4978960]
Enhancers that have rs149829443[chr19:4978960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149829443[chr19:4978960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4978953 4978968 TFAP2C JASPAR yes 112201602
chr19 4978954 4978963 THAP1 JASPAR yes 112201603
chr19 4978954 4978965 GCM1 JASPAR yes 112201604
chr19 4978955 4978968 TFAP2A JASPAR yes 112201605
chr19 4978955 4978968 TFAP2B JASPAR yes 112201606
chr19 4978955 4978968 TFAP2C JASPAR yes 112201607
chr19 4978955 4978970 TFAP2A JASPAR yes 112201608
Genes associated with rs149829443[chr19:4978960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More