EnhancerDB
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  3. rs150011685[chr17:39939860]
Enhancers that have rs150011685[chr17:39939860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39926525 39940665 enh17154
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Lung Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs150011685[chr17:39939860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39939850 39939860 GSC2 JASPAR yes 54276003
chr17 39939850 39939860 GSC JASPAR yes 54276004
chr17 39939851 39939860 PITX3 JASPAR yes 54276007
chr17 39939856 39939863 NKX3-1 JASPAR yes 54276008
chr17 39939856 39939871 MEF2C JASPAR yes 54276009
chr17 39939857 39939872 MEF2A JASPAR yes 54276010
chr17 39939858 39939870 MEF2A JASPAR yes 54276011
Genes associated with rs150011685[chr17:39939860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More