EnhancerDB
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Enhancers that have rs150029281[chr17:79399494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs150029281[chr17:79399494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79398783 79399616 TCF7L2 GTRD no Colon (HCT116) 21797978
chr17 79398783 79399616 TCF7L2 GTRD no Colon (HCT116) 108309618
chr17 79398987 79399510 TCF7L2 GTRD no Colon (HCT116) 21797980
chr17 79398987 79399510 TCF7L2 GTRD no Colon (HCT116) 108309620
chr17 79399389 79399699 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108309621
chr17 79399389 79399699 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108309622
chr17 79399483 79399503 RREB1 JASPAR yes 56327158
chr17 79399488 79399508 RREB1 JASPAR yes 56327159
chr17 79399490 79399505 RUNX2 JASPAR yes 56327160
Genes associated with rs150029281[chr17:79399494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More