EnhancerDB
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  3. rs150150287[chr1:212923393]
Enhancers that have rs150150287[chr1:212923393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212921265 212930417 enh914
Liver (HepG2) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs150150287[chr1:212923393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212923180 212923784 CTCF UCSC Txn Factor no Conserved 107869343
chr1 212923216 212923900 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379192
chr1 212923216 212923900 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869344
chr1 212923228 212923748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379193
chr1 212923228 212923748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869345
chr1 212923359 212923949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21379194
chr1 212923359 212923949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869346
chr1 212923388 212923403 SOX21 JASPAR yes 35150372
Genes associated with rs150150287[chr1:212923393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More