EnhancerDB
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  3. rs150199148[chr1:230216033]
Enhancers that have rs150199148[chr1:230216033]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs150199148[chr1:230216033]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230216015 230216036 IRF1 JASPAR yes 36019154
chr1 230216020 230216034 IRF7 JASPAR yes 36019156
chr1 230216021 230216036 MEF2A JASPAR yes 36019157
chr1 230216022 230216037 MEF2C JASPAR yes 36019158
chr1 230216030 230216045 RFX5 JASPAR yes 36019160
Genes associated with rs150199148[chr1:230216033], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More