EnhancerDB
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  3. rs150308173[chr16:28206857]
Enhancers that have rs150308173[chr16:28206857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs150308173[chr16:28206857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28206847 28206864 RARA JASPAR yes 10221711
chr16 28206848 28206867 CTCF JASPAR yes 10221712
chr16 28206850 28206860 NKX2-3 JASPAR yes 10221713
chr16 28206851 28206860 NKX2-8 JASPAR yes 10221714
chr16 28206855 28206868 NR2F1 JASPAR yes 10221715
chr16 28206856 28206864 CREB1 JASPAR yes 10221716
chr16 28206856 28206871 NR2C2 JASPAR yes 10221717
Genes associated with rs150308173[chr16:28206857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 28548606 28550495 - NUPR1 ENSG00000176046.7 28550495 341749 Stomach 0.718968 14682