EnhancerDB
  1. Home
  2. SNP
  3. rs150408628[chr16:88972405]
Enhancers that have rs150408628[chr16:88972405]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88969235 88997095 enh16904
Bone Marrow (K562) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs150408628[chr16:88972405]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88965138 88980036 ZNF274 GTRD no Blood (GM12878) 108224213
chr16 88965138 88980036 ZNF274 GTRD no Blood (GM12878) 108224214
chr16 88965671 88979843 ZNF274 GTRD no Blood (GM12878) 108224223
chr16 88965671 88979843 ZNF274 GTRD no Blood (GM12878) 108224224
chr16 88965820 88972609 TCF7L2 GTRD no Colon (HCT116) 21737316
chr16 88965820 88972609 TCF7L2 GTRD no Colon (HCT116) 108224225
chr16 88965820 88972609 TCF7L2 GTRD no Colon (HCT116) 108224226
chr16 88967390 88976026 STAT3 GTRD no Blood (OCI-LY7) 108224233
chr16 88967390 88976026 STAT3 GTRD no Blood (OCI-LY7) 108224234
chr16 88967989 88972416 ZNF143 GTRD no Epithelial (MCF-7) 21737318
chr16 88967989 88972416 ZNF143 GTRD no Epithelial (MCF-7) 108224259
chr16 88967989 88972416 ZNF143 GTRD no Epithelial (MCF-7) 108224260
chr16 88968053 88973555 TCF7L2 GTRD no Colon (HCT116) 21737319
chr16 88968053 88973555 TCF7L2 GTRD no Colon (HCT116) 108224261
chr16 88968053 88973555 TCF7L2 GTRD no Colon (HCT116) 108224262
chr16 88970063 88973486 TCF7L2 GTRD no Colon (HCT116) 21737331
chr16 88970063 88973486 TCF7L2 GTRD no Colon (HCT116) 108224291
chr16 88972401 88972405 LFA1 TRANSFAC yes 12307365
chr16 88972404 88972419 RUNX2 JASPAR yes 12307366
Genes associated with rs150408628[chr16:88972405], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More