EnhancerDB
  1. Home
  2. SNP
  3. rs150543719[chr1:201530561]
Enhancers that have rs150543719[chr1:201530561]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201518985 201542475 enh27421
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs150543719[chr1:201530561]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201530362 201530686 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21364667
chr1 201530381 201531409 ZNF274 GTRD no Bone Marrow (K562) 21364668
chr1 201530400 201531486 ZNF274 GTRD no Bone Marrow (K562) 21364669
chr1 201530418 201531179 ZNF274 GTRD no Bone Marrow (K562) 21364670
chr1 201530423 201531600 ZNF274 GTRD no Bone Marrow (K562) 21364671
chr1 201530466 201531264 ZNF274 GTRD no Bone Marrow (K562) 21364672
chr1 201530520 201531350 ZNF274 GTRD no Bone Marrow (K562) 21364673
chr1 201530529 201531360 ZNF274 GTRD no Bone Marrow (K562) 21364674
chr1 201530544 201531306 ZNF274 GTRD no Bone Marrow (K562) 21364675
chr1 201530549 201531305 ZNF274 GTRD no Bone Marrow (K562) 21364676
chr1 201530561 201530568 NKX3-1 JASPAR yes 34507043
Genes associated with rs150543719[chr1:201530561], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More