EnhancerDB
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  3. rs150628768[chr1:202040311]
Enhancers that have rs150628768[chr1:202040311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs150628768[chr1:202040311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202040294 202040314 ESR1 JASPAR yes 34549504
chr1 202040295 202040315 ESR1 JASPAR yes 34549505
chr1 202040298 202040318 PPARG JASPAR yes 34549507
chr1 202040300 202040315 ESR2 JASPAR yes 34549508
Genes associated with rs150628768[chr1:202040311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 202116141 202130716 - PTPN7 ENSG00000143851.11 202130716 75830 Thyroid 0.262054 1719