EnhancerDB
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  3. rs150896890[chr2:236416263]
Enhancers that have rs150896890[chr2:236416263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs150896890[chr2:236416263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236416245 236416265 ESR1 JASPAR yes 81975644
chr2 236416247 236416266 PAX5 JASPAR yes 81975645
chr2 236416248 236416266 ESR2 JASPAR yes 81975646
chr2 236416249 236416267 ESR2 JASPAR yes 81975647
chr2 236416250 236416265 ESR2 JASPAR yes 81975649
chr2 236416250 236416270 ESR1 JASPAR yes 81975650
chr2 236416257 236416268 ESRRA JASPAR yes 81975651
chr2 236416263 236416269 SOX10 JASPAR yes 81975652
Genes associated with rs150896890[chr2:236416263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More