EnhancerDB
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  3. rs1509084[chr2:235336166]
Enhancers that have rs1509084[chr2:235336166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235326485 235339375 enh19342
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr2 235336071 235336661 vista35269
VISTA
Transcript factors that have rs1509084[chr2:235336166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235336148 235336168 ESR1 JASPAR yes 22234721
chr2 235336148 235336168 ESR1 JASPAR yes 81876779
chr2 235336151 235336169 ESR2 JASPAR yes 22234722
chr2 235336151 235336169 NR3C1 JASPAR yes 22234723
chr2 235336151 235336169 ESR2 JASPAR yes 81876780
chr2 235336151 235336169 NR3C1 JASPAR yes 81876781
chr2 235336152 235336170 ESR2 JASPAR yes 22234724
chr2 235336152 235336170 ESR2 JASPAR yes 81876782
chr2 235336153 235336168 ESR2 JASPAR yes 22234725
chr2 235336153 235336168 ESR2 JASPAR yes 81876783
chr2 235336163 235336173 SP1 TRANSFAC yes 22234726
chr2 235336163 235336173 SP1 TRANSFAC yes 81876784
chr2 235336164 235336174 SP1 JASPAR yes 22234727
chr2 235336164 235336174 SP1 JASPAR yes 81876785
chr2 235336165 235336171 SP1 TRANSFAC yes 22234728
chr2 235336165 235336171 SP1 TRANSFAC yes 81876786
chr2 235336165 235336175 SP1 JASPAR yes 22234729
chr2 235336165 235336175 SP1 JASPAR yes 81876787
Genes associated with rs1509084[chr2:235336166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More