EnhancerDB
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  3. rs150942393[chr1:208004852]
Enhancers that have rs150942393[chr1:208004852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207976785 208007638 enh901
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs150942393[chr1:208004852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208004720 208005292 ZNF274 GTRD no Bone Marrow (K562) 21374530
chr1 208004826 208005162 ZNF274 GTRD no Bone Marrow (K562) 21374531
chr1 208004841 208004853 HES7 JASPAR yes 34880041
chr1 208004842 208004852 ID4 JASPAR yes 34880042
chr1 208004842 208004852 TCF3 JASPAR yes 34880043
chr1 208004842 208004852 TCF4 JASPAR yes 34880044
chr1 208004843 208004852 SNAI2 JASPAR yes 34880045
chr1 208004850 208004854 NFE TRANSFAC yes 34880047
chr1 208004851 208004856 GATA2 JASPAR yes 34880048
Genes associated with rs150942393[chr1:208004852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More