EnhancerDB
  1. Home
  2. SNP
  3. rs1539689[chr1:52363712]
Enhancers that have rs1539689[chr1:52363712]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52359912 52371075 enh11849
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs1539689[chr1:52363712]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52363695 52363716 IRF1 JASPAR yes 28874235
chr1 52363697 52363712 STAT2 JASPAR yes 28874236
Genes associated with rs1539689[chr1:52363712], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More