Enhancers that have rs1540388[chr16:29127033]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29121325 29129578 enh16621

Transcript factors that have rs1540388[chr16:29127033]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29126357 29127172 ZNF274 GTRD no Bone Marrow (K562) 108191286
chr16 29126527 29127078 ZNF274 GTRD no Bone Marrow (K562) 108191287
chr16 29126652 29127048 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108191290
chr16 29126685 29127035 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108191294
chr16 29126711 29127071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191298
chr16 29126711 29127154 CTCF UCSC Txn Factor no Conserved 108191299
chr16 29126763 29127033 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191309
chr16 29126780 29127130 RAD21 UCSC Txn Factor no Conserved 108191311
chr16 29126792 29127082 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108191312
chr16 29126799 29127049 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108191314
chr16 29126806 29127076 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108191315
chr16 29126823 29127067 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108191317
chr16 29126829 29127059 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108191318
chr16 29126856 29127046 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191320
chr16 29126858 29127034 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191321
chr16 29127020 29127039 PAX5 JASPAR yes 10242713
chr16 29127022 29127037 ZIC3 JASPAR yes 10242714
chr16 29127022 29127037 ZIC4 JASPAR yes 10242715
chr16 29127023 29127037 ZIC1 JASPAR yes 10242716
chr16 29127028 29127043 NR2C2 JASPAR yes 10242717
chr16 29127029 29127040 TBX20 JASPAR yes 10242718
chr16 29127030 29127038 MGA JASPAR yes 10242719
chr16 29127030 29127038 TBX15 JASPAR yes 10242720
chr16 29127030 29127038 TBX1 JASPAR yes 10242721
chr16 29127030 29127038 TBX4 JASPAR yes 10242722
chr16 29127030 29127038 TBX5 JASPAR yes 10242723

Genes associated with rs1540388[chr16:29127033], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More