EnhancerDB
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  3. rs1545246[chr15:99974743]
Enhancers that have rs1545246[chr15:99974743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99971645 99998102 enh16467
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1545246[chr15:99974743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99974191 99974883 ZNF143 GTRD no Epithelial (MCF-7) 21681997
chr15 99974274 99974822 TCF7L2 GTRD no Colon (HCT116) 21681998
chr15 99974729 99974744 FOXA1 JASPAR yes 25872808
chr15 99974730 99974745 FOXP1 JASPAR yes 25872809
chr15 99974731 99974743 FOXC2 JASPAR yes 25872811
chr15 99974731 99974745 FOXF2 JASPAR yes 25872812
chr15 99974732 99974743 FOXB1 JASPAR yes 25872816
chr15 99974732 99974743 FOXC1 JASPAR yes 25872817
chr15 99974733 99974744 FOXA1 JASPAR yes 25872824
Genes associated with rs1545246[chr15:99974743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More