EnhancerDB
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  3. rs1554232[chr2:236421824]
Enhancers that have rs1554232[chr2:236421824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1554232[chr2:236421824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236421820 236421840 PPARG JASPAR yes 81976523
chr2 236421821 236421827 ATF1 TRANSFAC yes 81976524
Genes associated with rs1554232[chr2:236421824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More