EnhancerDB
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  3. rs1562297[chr2:224681627]
Enhancers that have rs1562297[chr2:224681627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224677744 224699315 enh34325
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs1562297[chr2:224681627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224681620 224681631 USF1 JASPAR yes 81290604
chr2 224681620 224681631 USF2 JASPAR yes 81290605
chr2 224681621 224681631 SREBF2 JASPAR yes 81290606
chr2 224681623 224681628 USF2 TRANSFAC yes 81290607
chr2 224681626 224681639 NR2F1 JASPAR yes 81290608
chr2 224681627 224681635 CREB1 JASPAR yes 81290609
Genes associated with rs1562297[chr2:224681627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More