EnhancerDB
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  3. rs1569406[chr1:201538797]
Enhancers that have rs1569406[chr1:201538797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201518985 201542475 enh27421
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs1569406[chr1:201538797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201537319 201541087 ZNF143 GTRD no Epithelial (MCF-7) 107856678
chr1 201537506 201540703 ZNF143 GTRD no Epithelial (MCF-7) 107856679
chr1 201537766 201540685 ZNF143 GTRD no Epithelial (MCF-7) 107856680
chr1 201537788 201539147 ZNF274 GTRD no Bone Marrow (K562) 21364779
chr1 201537788 201540717 ZNF274 GTRD no Bone Marrow (K562) 21364780
chr1 201537788 201540717 ZNF274 GTRD no Bone Marrow (K562) 107856681
chr1 201537862 201539493 ZBTB33 GTRD no Brain (SK-N-SH) 21364781
chr1 201537914 201540604 ZNF143 GTRD no Epithelial (MCF-7) 107856682
chr1 201537930 201540781 ZBTB33 GTRD no Brain (SK-N-SH) 21364782
chr1 201537930 201540781 ZBTB33 GTRD no Brain (SK-N-SH) 107856683
chr1 201537992 201540768 ZBTB33 GTRD no Brain (SK-N-SH) 21364783
chr1 201537992 201540768 ZBTB33 GTRD no Brain (SK-N-SH) 107856684
chr1 201538063 201539351 ZBTB33 GTRD no Brain (SK-N-SH) 21364785
chr1 201538114 201539722 ZNF274 GTRD no Bone Marrow (K562) 21364786
chr1 201538127 201540586 ZNF143 GTRD no Epithelial (MCF-7) 107856685
chr1 201538132 201539557 ZBTB33 GTRD no Brain (SK-N-SH) 21364787
chr1 201538188 201540738 ZNF143 GTRD no Epithelial (MCF-7) 107856686
chr1 201538197 201541749 ZNF143 GTRD no Epithelial (MCF-7) 107856687
chr1 201538297 201540648 ZBTB33 GTRD no Brain (SK-N-SH) 21364788
chr1 201538297 201540648 ZBTB33 GTRD no Brain (SK-N-SH) 107856688
chr1 201538346 201539549 ZBTB33 GTRD no Brain (SK-N-SH) 21364789
chr1 201538473 201540950 ZBTB33 GTRD no Brain (SK-N-SH) 21364790
chr1 201538473 201540950 ZBTB33 GTRD no Brain (SK-N-SH) 107856689
chr1 201538474 201539538 ZBTB33 GTRD no Brain (SK-N-SH) 21364791
chr1 201538504 201540618 ZNF143 GTRD no Epithelial (MCF-7) 107856690
chr1 201538532 201539315 ZBTB33 GTRD no Brain (SK-N-SH) 21364792
chr1 201538551 201539287 ZBTB33 GTRD no Brain (SK-N-SH) 21364793
chr1 201538558 201539296 ZBTB33 GTRD no Brain (SK-N-SH) 21364794
chr1 201538567 201539238 MYOD GTRD no Muscle (Myoblast) 21364795
chr1 201538590 201539355 ZBTB33 GTRD no Brain (SK-N-SH) 21364796
chr1 201538633 201539292 ZBTB33 GTRD no Brain (SK-N-SH) 21364797
chr1 201538670 201540021 ZNF274 GTRD no Bone Marrow (K562) 21364798
chr1 201538737 201539360 ZNF274 GTRD no Bone Marrow (K562) 21364799
chr1 201538745 201539394 ZNF274 GTRD no Bone Marrow (K562) 21364800
chr1 201538759 201539365 ZNF274 GTRD no Bone Marrow (K562) 21364801
chr1 201538792 201538798 TCF4 TRANSFAC yes 34508165
Genes associated with rs1569406[chr1:201538797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More