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- rs1609697[chr16:1208869]
Enhancers that have rs1609697[chr16:1208869]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
1204345 |
1228235 |
enh31663 |
|
|
Transcript factors that have rs1609697[chr16:1208869]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
1207855
|
1210033
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684318
|
|
|
chr16
|
1207855
|
1210033
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171256
|
|
|
chr16
|
1208410
|
1209605
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108171257
|
|
|
chr16
|
1208657
|
1209795
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684319
|
|
|
chr16
|
1208657
|
1209795
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171258
|
|
|
chr16
|
1208862
|
1208876
|
PLAG1
|
JASPAR
|
yes
|
|
9139556
|
|
Genes associated with rs1609697[chr16:1208869], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
222846
|
223709
|
+
|
HBA2
|
ENSG00000188536.8
|
222846
|
985160
|
Thyroid
|
0.244349
|
14333
|
|