EnhancerDB
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  3. rs1622100[chr12:104972279]
Enhancers that have rs1622100[chr12:104972279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104958166 105005515 enh2574
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Heart
Transcript factors that have rs1622100[chr12:104972279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104972139 104972719 ZNF274 GTRD no Bone Marrow (K562) 21569458
chr12 104972139 104972719 ZNF274 GTRD no Bone Marrow (K562) 108055284
chr12 104972148 104972518 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569459
chr12 104972148 104972518 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055285
chr12 104972181 104972537 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108055286
chr12 104972209 104972649 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21569460
chr12 104972209 104972649 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108055287
chr12 104972213 104972623 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108055288
chr12 104972242 104972478 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21569461
chr12 104972242 104972478 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055289
chr12 104972244 104972474 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21569462
chr12 104972244 104972474 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108055290
chr12 104972252 104972532 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21569463
chr12 104972252 104972532 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108055291
chr12 104972261 104972279 IRF2 JASPAR yes 123393456
chr12 104972262 104972283 IRF1 JASPAR yes 123393457
chr12 104972266 104972280 IRF7 JASPAR yes 123393458
chr12 104972266 104972281 IRF9 JASPAR yes 123393459
Genes associated with rs1622100[chr12:104972279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More