EnhancerDB
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  3. rs1624488[chr1:182110965]
Enhancers that have rs1624488[chr1:182110965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182109705 182120799 enh12436
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Ovary Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1624488[chr1:182110965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182109927 182111841 ZNF274 GTRD no Bone Marrow (K562) 21357076
chr1 182110481 182111260 ZNF274 GTRD no Bone Marrow (K562) 21357077
chr1 182110504 182111140 ZNF143 GTRD no Epithelial (MCF-7) 21357078
chr1 182110537 182111131 ZNF274 GTRD no Bone Marrow (K562) 21357079
chr1 182110548 182111101 ZNF143 GTRD no Epithelial (MCF-7) 21357080
chr1 182110560 182111212 ZNF143 GTRD no Epithelial (MCF-7) 21357081
chr1 182110588 182111079 ZNF274 GTRD no Bone Marrow (K562) 21357082
chr1 182110608 182111081 ZNF143 GTRD no Epithelial (MCF-7) 21357083
chr1 182110695 182110972 ZNF143 GTRD no Epithelial (MCF-7) 21357085
chr1 182110739 182110977 ZNF143 GTRD no Epithelial (MCF-7) 21357086
chr1 182110965 182110979 GLIS3 JASPAR yes 33594894
Genes associated with rs1624488[chr1:182110965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More